# tmpdir
# 
# Directory used to store temporary files created during analysis etc.
# This directory must exist and be writable.
# 
# Example: 
#    tmpdir = /path/to/tmp/

tmpdir = /path/to/tmp

# datadir
# 
# The location of the default Workbench file location for each user.
# By default, a directory called "CLC_Data" under the user's home area
# is used as the default data area and will be created there if it 
# does not already exist.
#
# Important: do *not* set this location to be subfolder of an area already being used
# as a Workbench file location (or being used as a CLC Server file location).
#
#
# The following variables will be substituted:
#   $user    - the user name of the current user
#   $home    - the home directory of the current user
#   $product - the short name of the workbench (example: clcgenomicswb)
# 
# Examples: 
#   datadir = $home/CLC_Data         			(default)
#   datadir = X:\clcstorage\$user    			(on a separate disk or network mount in Windows)

datadir = $home/clcdata

# refdir
#
# For CLC Geomics Workbench, this specifies the default location of the reference data directory, CLC_References, for each user. 
# By default a directory called "CLC_References" under the user's home area is used as the reference data directory and will be created if it 
# does not already exist.
# refdir set to a path ending with CLC_References results in this folder being used to store reference data. 
# refdir set to a path ending in any other name results in a subfolder of that area called "CLC_References" being created under that area.  
# 
# The variables that can be used for datadir, documented above, can also be used here.
# 
# Important: do *not* set this location to be subfolder of an area already being used 
# as a Workbench file location (or being used as a CLC Server file location). 

# Examples:
#   refdir = $home/CLC_References         		(default)
#   refdir = X:\clcstorage\$user\CLC_References		(on a separate disk or network mount in Windows)
#   refdir = /scratch/$user/CLC_References              (results in /scratch/$user/CLC_References being used)
#   refdir = /scratch/$user				(results in /scratch/$user/CLC_References being used)

refdir = /scratch/$user